GACCA ATAGATGTAG GCAAAACCAC R CATACACATT AAAGAAAAAA ATATT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss45632465 | mCV22372165 | ABI | CRAMUS_MOUSE | f | SNP | A | A | G | A | ||
ss147446232 | ENSMUSSNP963110 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | A | |||
ss321314613 | CHEV_4_129362634 | CHEVERUD | SCREENING_POP | f | SNP | A | G | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32309982 | SNP | A | A | G | A | A | G |
Location: Chr4:129579183 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm68938 | predicted gene, 68938 | 455 bp downstream | ||||||
Mir7016 | microRNA 7016 | 819 bp upstream | ||||||
Tmem39b | transmembrane protein 39b | within coordinates | ||||||
Tssr43555 | transcription start site region 43555 | 645 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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