rs32311612 SNP Detail

Summary

• ID
  rs32311612
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:51623651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTGGGTG GCACTTACTC
  AGGTTCTGTG CCTCCCCGTT CTGTGATTTA GGCCAAATTA CTTTTATCTC AAAGCTCTGA
  TTGATTGATC TACACAGTAG GTATGTGGGG ACTTTGCTCC CAGATTAGCT GTAAGAATTT
  AAAAGATCCT ATTTACAAAG TGCCAGAAAC CTAATGTGAT AAGAACGCTC ATTGCTATCA
  R
  GTGTTAGGGG TATTGAAGGT TGGTAATCTA TATGCCTGTC ATTCATTACT ACCTAACAGG
  AACAAAGAAC AACAACAACA ACAACAAAAA CAGCAACAAT AACAAAACCC ACATAACTGA
  TTTCAGCTGG GTGAATCTTA GCAGTAGGTT GATGCTGATC TGTTCCGTAG TTCTCTAAGG
  GCCACTTAGA GTTTGTTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45132032	mCV23215987	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss149111639	ENSMUSSNP2501967	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32311612					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:51623651 () rs orientation: forward

Symbol	Name	Function Class
Gm17767	predicted gene, 17767	within coordinates
Gm70189	predicted gene, 70189	896 bp upstream
Rr366895	regulatory region 366895	439 bp upstream
Tssr6632	transcription start site region 6632	860 bp upstream
Tssr6633	transcription start site region 6633	921 bp upstream
Tssr11575	transcription start site region 11575	479 bp downstream
Tssr11576	transcription start site region 11576	770 bp downstream