rs32312711 SNP Detail

Summary

• ID
  rs32312711
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135160543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTGAATCT GAAACATGGA
  CGTGAGCCGC TAGAATCTTA ATCCCCAGAG GAGATGATGA GATTTCGCAC GGAAGCTGGA
  ACCCCACAAC CTGGAAACAG ACAGCTATTG AAGGGTTCAA GAGGAAGCGG ACAAGTTTCC
  AGATGCCAGG GAAGCAGAGA AGCACGAGGA TTCCTGCATC CTGGGGGAGG GGAGGAGAGA
  R
  GGGAGTGGGG CTTCCACCTG CTGCCAGGAG GGTTTTACTA GCCACACCTT CCCTGCCCTC
  CGGGAGGGGG GGGCCAGGTT GGGCCTGACA TCTTTCAAAA AGTCGAACTG CGGGTGGAGA
  AATTGCTGGT GGAGGAGAAA GGACCTGGGG GCGAGGGTTG TTTTGCAGGA CGTTACCCCG
  AAGCTGCTGG GGGAGATCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45632833	mCV25168398	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147546875	ENSMUSSNP2750927	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32312711					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135160543 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15072	CpG island 15072	within coordinates
Gm69862	predicted gene, 69862	697 bp upstream
Rcan3	regulator of calcineurin 3	within coordinates
Tssr39615	transcription start site region 39615	784 bp upstream
Tssr43991	transcription start site region 43991	512 bp downstream