rs32314005 SNP Detail

Summary

• ID
  rs32314005
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17095487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCGGTTCTC TTTCGAATGC
  CCTGCGGCCT CGACTCTTTC TTCCTTACTC TCTGACTCGC GATGTAGCGC ATCCTCTGCC
  CTGAATCCCT ATTGCCATCC TTCAGGAGCT GCAGGGGAAA GTGATGGAGG CAGCAGCTGC
  GCTGGAGGCT ACGCGCGGTG GCTCGGAACC GTAAGAATTG GGACTTGGAG GGCGTCGGAA
  R
  GTGCTAGGCC CAGCCTGGTG GCTCATCTCC GCGCCTGTCC TGCAGGTGGA ACTCAGAGCC
  TCGTCCGGTG CAGGACTGCG CGGGCTCACT CATGGAGGAG GTGGCCAGGG CTGACTGCGT
  GAGCGTGGGC TGGGAAGCGC GGGCTGAAGC TGGTACCTGC CCACTAGATT TGGCTAGAGC
  CTAGCGGCTG CCCAGGCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss48150946	NES12129411	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32314005					SNP	G	G	G	G	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48150946	NES12129411	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17095487 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8012	CpG island 8012	within coordinates
Gm49573	predicted gene, 49573	905 bp downstream
Rr316836	regulatory region 316836	1487 bp distal
Rr324991	regulatory region 324991	within coordinates
Rr370056	regulatory region 370056	1231 bp downstream
Tmem191	transmembrane protein 191	within coordinates
Tssr137285	transcription start site region 137285	1293 bp downstream
Tssr137286	transcription start site region 137286	1265 bp downstream
Tssr137287	transcription start site region 137287	943 bp downstream