rs32316592 SNP Detail

Summary

• ID
  rs32316592
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:10982097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTGCTGCG TGGCGTCAGG
  GTTGTGGAGC TGGCAGGCCT GGCCCCGGGG CCGTTCTGCG GAATGGTCCT GGCGGACTTC
  GGCGCCGAGG TGGTGCGCGT GAACCGGCTG GGCTCCACGG GCGAGAATTT TCTGGCCCGA
  GGCAAGCGCT CGCTAGCGCT GGACCTGAAG CGCTCTCAGG GAGTCACGGT GTTGCGGCGC
  W
  TGTGCGCACG CGCGGACGTG TTGCTGGAGC CCTTCCGCTG CGGTGAGCCC TGCGGTGCTG
  CGAGATGACA TTCCCTCCTG CCCGATTTCT CCCAGCTTCT CTGACTCCTT CTTAAGACTT
  TTAATTTGCT TGATTCCCCC CCCCCCAGAT TTGCCTTTAT TATTTGGAGG TATTGAACCG
  TACGAGAATC TAGTGCAAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39389465	mCV24566633	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss147066968	ENSMUSSNP292466	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32316592					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:10982097 () rs orientation: forward

Symbol	Name	Function Class
Amacr	alpha-methylacyl-CoA racemase	within coordinates
C1qtnf3	C1q and tumor necrosis factor related protein 3	1861 bp downstream
Cpgi6946	CpG island 6946	within coordinates
Gm34315	predicted gene, 34315	378 bp upstream
Tssr130700	transcription start site region 130700	246 bp downstream
Tssr130701	transcription start site region 130701	206 bp downstream