rs32317121 SNP Detail

Summary

• ID
  rs32317121
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30254665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAACC CCAAACTCAA ACTGTATGGA
  Y
  ACTTCAACTT CTCCAGATGT GCTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss46131245	mCV25394711	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss148682381	ENSMUSSNP2995446	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs32317121					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30254665 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18809	CpG island 18809	1706 bp distal
Cpgi18810	CpG island 18810	643 bp distal
Hspb6	heat shock protein, alpha-crystallin-related, B6	within coordinates
Lin37	lin-37 DREAM MuvB core complex component	201 bp downstream
Tssr65780	transcription start site region 65780	1968 bp downstream
Tssr65781	transcription start site region 65781	1931 bp downstream
Tssr65782	transcription start site region 65782	446 bp downstream
Tssr65783	transcription start site region 65783	380 bp downstream
Tssr65784	transcription start site region 65784	356 bp downstream
Tssr65785	transcription start site region 65785	301 bp downstream
Tssr65786	transcription start site region 65786	288 bp downstream
Tssr65787	transcription start site region 65787	193 bp downstream
Tssr71789	transcription start site region 71789	552 bp upstream
Tssr71790	transcription start site region 71790	410 bp upstream