rs32318562 SNP Detail

Summary

• ID
  rs32318562
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17159909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGCCCATGC ATAGTTTCCT
  CAAAGACTGT AAATCATCTC TGCCTCGCTT TTTTTTTTTT TTTAAATATG GAACACTTCA
  CCAATTTGTG TGTCATCCGT GCACAGGGGC CATGCTAATC TTCTCTGTAT CGTTCCAATT
  TTAGTTTATG TGCTCCCAAA GTGAGCACTG CCTCACTTCT TATAATAATA CTATAGGAAC
  M
  CCTGACCAAC AGTTGTTCCA TTTCCTGTTT CCAGAGTGAG GAGAGTGAGA ACTCCGCACA
  TGCTCAGTCA GATGCTGAGA ACCATGGCTG ATGAAACTCA CTGATCTAAG GGCTAACTGT
  AACTGGACTC ACAGTGGGTG TTTTCTTTAC AAAACCCTCA ATGGACAGTA CCAGTATATA
  AGTCTTAAAC ACAAAAAATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48151467	NES12127883	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32318562					SNP	C	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48151467	NES12127883	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17159909 () rs orientation: forward

Symbol	Name	Function Class
Gm24927	predicted gene, 24927	33 bp upstream
Pi4ka	phosphatidylinositol 4-kinase alpha	within coordinates
Serpind1	serine (or cysteine) peptidase inhibitor, clade D, member 1	within coordinates