rs32319206 SNP Detail

Summary

• ID
  rs32319206
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17092558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAAGAAAA TGATTAAGCA
  GGTTCCTAGG GAAGTAAGGG GTTGTGTCAA GACCAGCCTG GCTGCAGAAT GAGACCCCTT
  GAGCTAACAG AACCCCTAGA TCACAAAACT ACATCCCTCC TTTTCTTACT CATACCACAC
  AAGCCCAATC AAAGGTTCTC TAGAGCTGAA ACCATGGAGA AAAGAGACCA TCAGGCCACC
  S
  TAGCACCCAG GTCCTCCCAG GTCCTTCAGC ACCACTCAGC ACGGCACTAT GCTAGGGAAA
  ATCCAGCCAC TGAGACCACG ACAAAGTTTC ATAGCACATG GGGGAGAAAA ACATTAAAAA
  TTTTAATTTT AAATGTTTTT CTCAAGCCGG GCACGGTGGC GCATGCCTTT AATCCCAGCA
  CTTGGGAGGC AGAGGCAGGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss48150922	NES12129446	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32319206					SNP	C	C	C	C	C	C	C	C	C	C	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48150922	NES12129446	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17092558 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8012	CpG island 8012	1393 bp proximal
Gm49573	predicted gene, 49573	within coordinates
Rr370056	regulatory region 370056	1367 bp upstream
Tmem191	transmembrane protein 191	1606 bp upstream
Tssr137285	transcription start site region 137285	1597 bp upstream
Tssr137286	transcription start site region 137286	1643 bp upstream
Tssr137287	transcription start site region 137287	1968 bp upstream