rs32320922 SNP Detail

Summary

• ID
  rs32320922
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4840944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAC ACCAGTCCTG CCTGGGTTCC
  K
  CTCCTCAGCA AACCAGCCAC ATTCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss45133160	mCV24645054	ABI	CRAMUS_MOUSE	f	SNP		T	T			G
ss50908924	NES13484802	PERLEGEN	MM_PANEL2	f	SNP	T		T	G	G	G		T	T		G
ss319612287	CHEV_1_4760802	CHEVERUD	SCREENING_POP	f	SNP							G			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs32320922					SNP	T	T	T	G	G	G	G	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50908924	NES13484802	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4840944 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	410 bp upstream
Rr407423	regulatory region 407423	391 bp distal
Rr407424	regulatory region 407424	645 bp distal
Tssr5799	transcription start site region 5799	373 bp upstream