rs32321872 SNP Detail

Summary

• ID
  rs32321872
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136938227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTGCTCCA GCCCCCACCT GGTTCTTGGT
  TGGGTTTGGT CAGTGGGTGG CACCTGCTGG AGAGTGCTGG GAAGAGAGGC CTTATCTCCA
  TGCAGGGTGG CCTCAGGCTG ATTGGCCGGA CTTCCCAAAG CTGTAGCTCG CTTTGGCTGG
  Y
  ATTTCTCCAC AATGCTTTAT CTCTAGGCTG CTGTACTTCG TTGACCAAGT CCATAAACAC
  ACCTTCTTTC TGATACTTCA GGCACTAAAC CAGTGAGCAG TTTCTTTTCC AGTTCTTACA
  TGGCAGGCAA TTTGAGTAGA CTTCAGTGTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45133171	mCV23233647	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss145563686	ENSMUSSNP5795647	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
ss319997364	CHEV_1_138907066	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32321872					SNP	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136938227 () rs orientation: forward

Symbol	Name	Function Class
Gm70790	predicted gene, 70790	within coordinates
Rr419562	regulatory region 419562	within coordinates
Rr419563	regulatory region 419563	86 bp distal