rs32322613 SNP Detail

Summary

• ID
  rs32322613
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126293288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGAATCAC ATCCAAAGGC
  CCAGGTCTAT ATGATGGGGC TGGAATGCCA ACACGGCCTG GACTACAGTA TGATTTGCTG
  GAACGCAGAC ACGCCCTTTC ATCCCTACAG TGAAGGTAAG GTGAGTTTGT AGACGCAGCC
  ATGTTTGAAA ATGACATCTA ATTAAAGGGC AGATGTCCAA CCTACATGAA AACAACACAG
  K
  AAAGAGAAGC TACTTAAGAG CAGAGAGAGG GGGCTGGTGA GATGGCTCAG TGGGTAAGAG
  CACCCGACTG CTCTTCCAGA GGTCCTGAGT TCAAATCCCA GAAACCACAT GGTGGCTCAC
  AACCATCTGT AATGGGATCT GATGCCCTCT TCTGGTGTGT CTGAAGATAC AACAGTGTAC
  TCATATACAT TAAATAAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss46131817	mCV23683977	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs32322613					SNP	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126293288 () rs orientation: forward

Symbol	Name	Function Class
Bola2	bolA family member 2	1884 bp upstream
Cpgi19704	CpG island 19704	1328 bp distal
Cpgi19705	CpG island 19705	1223 bp proximal
Rr368435	regulatory region 368435	1540 bp upstream
Rr400629	regulatory region 400629	434 bp downstream
Rr400630	regulatory region 400630	1117 bp upstream
Rr655564	regulatory region 655564	356 bp distal
Rr655565	regulatory region 655565	665 bp distal
Rr655566	regulatory region 655566	489 bp distal
Rr655567	regulatory region 655567	810 bp proximal
Rr655568	regulatory region 655568	830 bp proximal
Rr655569	regulatory region 655569	1138 bp proximal
Rr655570	regulatory region 655570	1642 bp proximal
Rr655571	regulatory region 655571	1658 bp proximal
Rr655572	regulatory region 655572	1849 bp proximal
Slx1b	SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	within coordinates
Tssr69055	transcription start site region 69055	1239 bp upstream
Tssr69056	transcription start site region 69056	1826 bp upstream
Tssr74794	transcription start site region 74794	1598 bp downstream
Tssr74795	transcription start site region 74795	1615 bp downstream