rs32325480 SNP Detail

Summary

• ID
  rs32325480
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148372651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGCTCTGCG TCACCGTCCG GCTTAGGCTT GCTCTCCGCC
  GCGCGCTGCT GTCTCCCGAT TCCGCCGCCA GGCGCCGCCC TGGCTGCCGC TCCCCCTGCG
  R
  GAGCCGCGTG GTGGTACAGC CAGCTTCCCG TGTTGGCGAG CAGGGACTGA GCACAGCGCA
  GCGACCCCTG GGGGTCAGTC TTAGTCTCTG CAAACGGAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45634281	mCV24938553	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss148000238	ENSMUSSNP1147487	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32325480					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148372651 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15301	CpG island 15301	within coordinates
Disp3	dispatched RND transporter family member 3	229 bp upstream
Gm68159	predicted gene, 68159	73 bp upstream
Rr604639	regulatory region 604639	240 bp distal
Rr604640	regulatory region 604640	within coordinates
Rr604641	regulatory region 604641	19 bp distal
Rr604642	regulatory region 604642	84 bp proximal
Rr604643	regulatory region 604643	103 bp proximal
Rr604644	regulatory region 604644	217 bp proximal
Rr604645	regulatory region 604645	383 bp proximal
Tssr44603	transcription start site region 44603	240 bp upstream