rs32326815 SNP Detail

Summary

• ID
  rs32326815
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:134486828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAT CGCCGGGCGG TGGTGGCACA
  S
  GCCTTTAATC CCAGCACTTG GGAGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45133834	mCV23638911	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss145508374	ENSMUSSNP5806740	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss319983173	CHEV_1_136455667	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs32326815					SNP	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134486828 () rs orientation: forward

Symbol	Name	Function Class
Cpgi773	CpG island 773	796 bp proximal
Gm57134	predicted gene, 57134	1988 bp upstream
Kdm5b	lysine demethylase 5B	1088 bp upstream
Rr367005	regulatory region 367005	1830 bp downstream
Rr367006	regulatory region 367006	951 bp upstream
Rr418945	regulatory region 418945	1999 bp distal
Rr418948	regulatory region 418948	1637 bp distal
Rr418949	regulatory region 418949	598 bp proximal
Tssr8904	transcription start site region 8904	1067 bp upstream
Tssr8905	transcription start site region 8905	1100 bp upstream
Tssr8906	transcription start site region 8906	1124 bp upstream