rs32328183 SNP Detail

Summary

• ID
  rs32328183
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:131565420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCTC ACAACCATCC GTAATGAGAT
  Y
  TGACGCCCTC TTCTGGTGTG TCTGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45134430	mCV25112560	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32328183					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:131565420 () rs orientation: forward

Symbol	Name	Function Class
Ctse	cathepsin E	632 bp upstream
Rr12195	regulatory region 12195	20 bp distal
Rr28482	regulatory region 28482	180 bp proximal
Rr366988	regulatory region 366988	532 bp upstream
Tssr8635	transcription start site region 8635	588 bp upstream
Tssr8636	transcription start site region 8636	624 bp upstream
Tssr8637	transcription start site region 8637	672 bp upstream
Tssr8638	transcription start site region 8638	706 bp upstream
Tssr8639	transcription start site region 8639	758 bp upstream
Tssr8640	transcription start site region 8640	803 bp upstream