rs32328622 SNP Detail

Summary

• ID
  rs32328622
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110231950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGTGATTC TGAGAGCTTT
  CCATGGGAGC TAGTAGGATG GGGAAGGGGA ACTGCTCTAG CGCTGAGCTC AATAAGCACA
  AAGGAAAGAA ACAAAGTGAG TTGTGAATTC CTGGTCTTCC TTGGAAGCAA GGATCATAAA
  TCAGGAATGG CTTTCCTCAT CCTGAGCTAG GCTACTGGCC TCTTTGGTTT GCATTGCCAA
  M
  TATAGTTAGA ACATACACTG AGGCCTCCGG AGCTGGCTTC TGAGAGAAGG GCCTTCTGAG
  AAGCTATTCC TGGCTGTGCA CAGTCCTGCA CTGTAGTTCT CCAGTCGCCT GGAAGAACAC
  CTGTGTCTAC AAAGCCGCAA ATAGCATTTC CACCCTCGAG GTGGGACCTT TTGTTTTGGC
  ATCTGCTATC CACGGCAGCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46131883	mCV23101138	ABI	CRAMUS_MOUSE	f	SNP		A					C		C
ss50455933	NES14118495	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	C	C	C		A	C	C	C		A	A	C	A		A
ss145645204	ENSMUSSNP5809058	ENSEMBL	ENSEMBL_Sanger	f	SNP		A							C
ss322397551	CHEV_7_117776257	CHEVERUD	SCREENING_POP	f	SNP												A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32328622					SNP	C	A	A	C	C	C	C	A	C	C	C	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50455933	NES14118495	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110231950 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19578	CpG island 19578	1940 bp distal
Gm28863	predicted gene 28863	1846 bp upstream
Rr653274	regulatory region 653274	820 bp distal