rs32328795 SNP Detail

Summary

• ID
  rs32328795
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:24098940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACCCGGGAT TCGAACTCGA AATCTCCAGA GCTGCCCACC
  CAGCCAAACA GCAGGCCCGC CCAGAGAAAC AATGCGCACG CGCCTTCTCA GCAGCAACAT
  R
  CTCCCTCGCC CCTCCGTAAT CCGCATGCGT GCTGAAGCCA GCCACCTCCA TTCACGCATG
  CTCAGTCTAA CGCGCACGTT GGGTTCGCTT GCGCGCCCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46132329	mCV25416435	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148598602	ENSMUSSNP5315327	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss322120426	CHEV_7_25184534	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32328795					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:24098940 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18537	CpG island 18537	within coordinates
Gm74022	predicted gene, 74022	within coordinates
Rr643436	regulatory region 643436	1266 bp distal
Rr643437	regulatory region 643437	within coordinates
Rr643438	regulatory region 643438	115 bp proximal
Rr643439	regulatory region 643439	410 bp proximal
Rr643440	regulatory region 643440	1058 bp proximal
Smg9	SMG9 nonsense mediated mRNA decay factor	166 bp upstream
Tssr64959	transcription start site region 64959	91 bp upstream
Tssr64960	transcription start site region 64960	159 bp upstream
Tssr64961	transcription start site region 64961	298 bp upstream
Tssr64962	transcription start site region 64962	444 bp upstream
Tssr64963	transcription start site region 64963	462 bp upstream
Tssr64964	transcription start site region 64964	498 bp upstream
Tssr71075	transcription start site region 71075	343 bp downstream