rs32330480 SNP Detail

Summary

• ID
  rs32330480
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:42299089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCC CTCGTTTCTT CTTCTTTTAT
  Y
  TCTCTCTCTC TCTCTCTCTC TCTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45134728	mCV22574205	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss149000234	ENSMUSSNP5457263	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32330480					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:42299089 () rs orientation: forward

Symbol	Name	Function Class
Gm28175	predicted gene 28175	within coordinates
Gm70195	predicted gene, 70195	882 bp downstream
Rr406833	regulatory region 406833	1386 bp distal
Rr410203	regulatory region 410203	960 bp distal
Rr410204	regulatory region 410204	114 bp distal
Rr410205	regulatory region 410205	within coordinates
Rr410206	regulatory region 410206	1744 bp proximal
Tssr6506	transcription start site region 6506	119 bp downstream
Tssr6507	transcription start site region 6507	1994 bp upstream