rs32333460 SNP Detail

Summary

• ID
  rs32333460
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17654327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGTGAACTG ACTGTCTTCA
  TGGCTAGCTT CATTTATAGA GCGTCCCCTG CCACCTCCCT ACATCATGTG TAGAGCCTCC
  TCTTCATTCA CGAGGATTTG GACTCATCTG TGTATCCCAT TGTTAAAGCT GCTTAGCCCA
  TTTGTGTGCA TGTGTTGGTG GGGGGCAGTG AGCTCTTCTG AGTTCTCTAA GTCTTTCAGA
  S
  CTGAAGATCC CTGGTCCCTC CACACAACTC CAAGTCCCTG TTTCTGGAAA CATGTACGGG
  GCCACAGCCC CTTCCTCACC ACCAACAGCA CAGCCAGTAT AGCAAACCCA TCTGGTTGGC
  TCCGTGCATC CTCCATGCTC TGGTACTTTG TGTTCATGTG GACCATGTGC ATCTAGGGGA
  TACAGAACAA AGGTAGTGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48153651	NES12111406	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32333460					SNP	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48153651	NES12111406	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17654327 () rs orientation: forward

Symbol	Name	Function Class
Car15	carbonic anhydrase 15	within coordinates
Cpgi8029	CpG island 8029	1887 bp distal
Fam246a	family with sequence similarity 246 member A	1455 bp downstream
Gm20518	predicted gene 20518	within coordinates
Rr325011	regulatory region 325011	1526 bp distal
Tssr140212	transcription start site region 140212	1663 bp downstream
Tssr140213	transcription start site region 140213	1710 bp downstream