rs32333462 SNP Detail

Summary

• ID
  rs32333462
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17654427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGAAGATC CCTGGTCCCT CCACACAACT CCAAGTCCCT
  GTTTCTGGAA ACATGTACGG GGCCACAGCC CCTTCCTCAC CACCAACAGC ACAGCCAGTA
  Y
  AGCAAACCCA TCTGGTTGGC TCCGTGCATC CTCCATGCTC TGGTACTTTG TGTTCATGTG
  GACCATGTGC ATCTAGGGGA TACAGAACAA AGGTAGTGAC                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48153653	NES12111407	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32333462					SNP	T	T	T	T	T	T	T	T	C	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48153653	NES12111407	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17654427 () rs orientation: forward

Symbol	Name	Function Class
Car15	carbonic anhydrase 15	within coordinates
Cpgi8029	CpG island 8029	1987 bp distal
Fam246a	family with sequence similarity 246 member A	1555 bp downstream
Gm20518	predicted gene 20518	within coordinates
Rr325011	regulatory region 325011	1626 bp distal
Tssr140212	transcription start site region 140212	1563 bp downstream
Tssr140213	transcription start site region 140213	1610 bp downstream