rs32333727 SNP Detail

Summary

• ID
  rs32333727
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:43114616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAGCTGCT CATCTCACGT
  CCGGTACGCA GCGACCACGC CCGGTACACT TGCCAGGTCC GAAGCCCCTT TGGCCACACC
  GAAGCTGCAG CTGACGTCAG TGTTTTCTGT GAGTAGGAGA ATGTCACCTG AGGATTCGAG
  TCTTGAATCC CCGGGGAGAA GTGAGCCCAA TGTCTGTGAG TTCTTTAACA GTCCAACCCC
  Y
  TTTTTTTGTC CCCAACCCCA CACCCAAGAC GGCCCGGACG CTCCTGTCAT TAGGGTCTCC
  TCGGACCGGG ATGCCAGTCC TGCGCTCTAC GTCACTGCGG GCAGCAATGT GACCTTGCAT
  TGCTCGGCCC CCTCGCGGCC GCCCGCGGAC ATCGCGTGGA GTCTGGCAGA CCCCACAGAG
  GCCGCAGTGC CTGCGGGGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46133308	mCV22871766	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss149073704	ENSMUSSNP4411440	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss322197030	CHEV_7_50720562	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32333727					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:43114616 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18932	CpG island 18932	within coordinates
Cpgi18933	CpG island 18933	970 bp proximal
Etfbl	electron transferring flavoprotein, beta polypeptide like	1605 bp downstream
Gm39000	predicted gene, 39000	within coordinates
Rr400282	regulatory region 400282	538 bp upstream
Rr645966	regulatory region 645966	328 bp distal
Rr645967	regulatory region 645967	316 bp proximal
Rr645968	regulatory region 645968	378 bp proximal
Rr645969	regulatory region 645969	386 bp proximal
Rr645970	regulatory region 645970	1078 bp proximal
Rr645971	regulatory region 645971	1385 bp proximal
Tssr66008	transcription start site region 66008	1977 bp downstream
Tssr66009	transcription start site region 66009	1966 bp downstream
Tssr66010	transcription start site region 66010	816 bp upstream
Tssr72134	transcription start site region 72134	940 bp upstream
Tssr72135	transcription start site region 72135	371 bp downstream
Vsig10l	V-set and immunoglobulin domain containing 10 like	within coordinates