rs32333817 SNP Detail

Summary

• ID
  rs32333817
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128679129 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG AGAAAAGAAA GTTACCTGGG
  W
  CATAAACATA TGGGAAGCAT CCCGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss45135021	mCV25298161	ABI	CRAMUS_MOUSE	f	SNP	A	A		T		A
ss60795864	NES16470103	PERLEGEN	MM_PANEL2	f	SNP			A		T			T	T		A
ss145468830	ENSMUSSNP4935724	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A				A
ss319966925	CHEV_1_130647969	CHEVERUD	SCREENING_POP	f	SNP							A			A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs32333817					SNP	A	A	A	T	T	A	A	T	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60795864	NES16470103	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128679129 () rs orientation: forward

Symbol	Name	Function Class
Gm29599	predicted gene 29599	45 bp downstream
Gm70593	predicted gene, 70593	within coordinates