rs32333956 SNP Detail

Summary

• ID
  rs32333956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:93440517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGGATATA AGTTTTAATT AACTGTCTCA CTTGCCCAAA
  ACTCATTCAG TCAATACATC ATAATTGATG CTTAAACATT ATCCTCCTCT TCATTCCCAA
  R
  CAAAGTCAGA TTGAACTATG TTAGAAATAT ATCTCAAAAG TTATATAGGC TGGGCAGTGG
  TAGCACACGC CTTTATTCCC AGCACTCGGG AGGCAGAGGC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49340262	NES12579391	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32333956					SNP	A	A	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49340262	NES12579391	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:93440517 () rs orientation: forward

Symbol	Name	Function Class
Gm17922	predicted gene, 17922	180 bp upstream
Pcdh9	protocadherin 9	Intron
Tssr129946	transcription start site region 129946	964 bp upstream
Tssr129947	transcription start site region 129947	937 bp upstream
Tssr129948	transcription start site region 129948	845 bp upstream