rs32334216 SNP Detail

Summary

• ID
  rs32334216
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:161802444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAACTAGG CAATAGAGGA
  ATTAAAAATA GGTGACAGAA TGACAAATTG AATAACCCAA ATGATAGAAA TCAAAGGGAC
  AGGAAGCAGC CTTCTAAAAA TTGGAGTAGA CACTGGAACT CAGTCCAGAA GGAACATTCA
  GGACATGTGA CCATGGCCTA TATATTACTA AAGGTCTACA TTACTATAGA GTTCACTAGT
  R
  GGGGAATTAG CAAACCTTTC TCAAACTCTG AAAAAAAAAG TCAGAGGGTA AAAGCAACTG
  TCCACGTGTT CGTTAGATTA TGTCTTACAG AAGACAAAAT GCCGAAGCAG CACCAGGCTA
  AGTCTGGACC ATATGAAAAT ATAATTTTCC TGGAATTTTT GCATTTTTTC CGGGGAAAAA
  AAATCTAATA GGCCAGCAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45135522	mCV24531160	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss145926266	ENSMUSSNP6096615	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32334216					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161802444 () rs orientation: forward

Symbol	Name	Function Class
4930558K02Rik	RIKEN cDNA 4930558K02 gene	Intron
Gm38304	predicted gene, 38304	within coordinates
Pigc	phosphatidylinositol glycan anchor biosynthesis, class C	1440 bp downstream
Rr396470	regulatory region 396470	1568 bp upstream
Rr421879	regulatory region 421879	1049 bp proximal
Rr421880	regulatory region 421880	1659 bp proximal
Rr421881	regulatory region 421881	1725 bp proximal