rs32334258 SNP Detail

Summary

• ID
  rs32334258
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125670010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cagtctatt atcatctagg tgggagcatg
  gcagcatctg ggcaggcatg gtgcaggacg agatgagaat tctacatctt catctgaagg
  ctgctaggag aagactggct tccaggcagc taggatgaga gtcttaaagc tcacgctcac
  R
  gtgacatgcc tactccaaca ggccacagct attcccagac cacacctcct aatagtacca
  ctccctgggc caagcatata caagccatca TGCACACTGC AGCTAAATAA AAAGGACCTA
  TCTTTTCACT ACAAAGAAAT AACTACTCTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45134583	mCV23282462	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss145412463	ENSMUSSNP4615708	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss319956338	CHEV_1_127638850	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32334258					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125670010 () rs orientation: forward

Symbol	Name	Function Class
Gpr39	G protein-coupled receptor 39	within coordinates
Rr371980	regulatory region 371980	1897 bp upstream