rs32335491 SNP Detail

Summary

• ID
  rs32335491
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:93438081 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTATTTTGT GAAATGATTT
  TTTTACGTAT ACTACTGTAT TTATTTTCAC TTCCTGTTTC ATGTGCCAAG TCGTCAGGAC
  GATTAATTAC TTCAAGAATG GCAAGCATTT GTAGGCTTTT CAGTGCTGTG CATTTTAAAA
  CAATAATGGT GGAATAAACA GTCTCTCTAT CAGTTACCTA GCGTGAATAT GTTTCTTGCG
  R
  CACTCGATGC GGGATTATGT ACATTAGTTA TGAAGCCAGC AGCTTGGAGC ACGATGTCAA
  TGATTCTTCA GTGAGTTACA ATTAGATCCT TGTACCAACA ATTAACTATT TGTCCTGTGT
  TTAATAGTGA ACATGGCCTC ATATCACAAG CAATTAAGTT CTTAATAATA CAATTAGTAG
  CAAGACCAAA TGCAAGCCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss49340287	NES12579463	PERLEGEN	MM_PANEL2	f	SNP	A			A	A	A	A		A	A	A		G
ss146667241	ENSMUSSNP1297025	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G			A
ss324742162	CHEV_14_93599864	CHEVERUD	SCREENING_POP	f	SNP								A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32335491					SNP	A	A	G	A	A	A	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49340287	NES12579463	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:93438081 () rs orientation: forward

Symbol	Name	Function Class
Gm17922	predicted gene, 17922	1455 bp downstream
Pcdh9	protocadherin 9	within coordinates
Tssr129946	transcription start site region 129946	1461 bp downstream
Tssr129947	transcription start site region 129947	1488 bp downstream
Tssr129948	transcription start site region 129948	1580 bp downstream