rs32336576 SNP Detail

Summary

• ID
  rs32336576
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:17631783 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCAGAAGAG GACATCAAGT
  GTCTTGTTCC ATCACTCTCT GACTTTTTCC TTCAAGACAG GAGCTAGGAT GGCAGCCAAC
  AAGGCTCAGA GATCCTCCTG TCCCTCCTTG ATTCAGCATT GGGAGGGTAT GTGTGCTCTG
  GGGACTAGAA CTCAGGTTTT TATGTTGTCA CCTCTGTGAC ATTTCTCCAG AGCTTTTAAT
  Y
  TGTGTGTGTA TCTGTGTGTG CATGCTTGTG GGGAGACACC AGGTGCCTTC CTTTATGGCT
  TTCTACATTA GTTGTTTATT TTGAGATGGT CTCACTATAG AGCTCTGGCT GGCCCAGAAC
  TCTCTCTCTC TGTAGACCAG TCTGGCATCA AACTCACAGA GATTCTCCTG CCTCTGCCTC
  CCAAGTGCTG ATATGAAAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48153593	NES12112075	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32336576					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48153593	NES12112075	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:17631783 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8028	CpG island 8028	1207 bp proximal
Rr316898	regulatory region 316898	1183 bp distal
Rr316899	regulatory region 316899	1018 bp proximal
Rr320388	regulatory region 320388	1782 bp distal
Rr325010	regulatory region 325010	1217 bp proximal
Zfp520-ps	zinc finger protein 520, pseudogene	1257 bp downstream