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rs32337559 SNP Detail
Summary
  • ID
    rs32337559
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr16:17661183 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CCTCAAGTCT ACCTTGCCTT
    GGACTTTGGG CTGTTTCTAA ATGCTGGTGA TGAGGCCTTG GCTATGGACA GCCTCCAGGA
    CTCCAACCCT GCCCTGAAGC CGAGGCTGGG CAGAGTGGGG ATCTACAGCC ATCTAGTACA
    GTCTCGGCAG AAAGCTTTCT TTCTCAACCT CTCTGGTGTG AAGGTCCAAG AGAGGGCTTC
    K
    ATGCTAGGCA AACATGCTGT CAGTTGAGCT CCCAGCTGTG ACTGTGGCCT CTAAGAGGAG
    TTTCTGACAA TCTGACCCGA AGGCAGGAAT CATAGTCTCC TAGTCCTAGA CCACAGCAGT
    GTTAAAAGTC CCACTCTGAT ACAGAGTGCA GGCCTGTAAG GAGCCAGGCA TGTTCCACAC
    AAGGAACAGG ACACAACTGC                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss48153701 NES12111217 PERLEGEN MM_PANEL2 f SNP T T T T T T G T T T T T G T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs32337559 SNP T T T T T T G T T T T T G T
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss48153701 NES12111217 PERLEGEN MM_PANEL f SNP G/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr16:17661183 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Del(16Dgcr2-Hira)1Rak deletion, Chr 16, Raju Kucherlapati 1 within coordinates
Del(16Dgcr2-Hira)3Aam deletion, Chr 16, Alea A Mills 3 within coordinates
Dgcr2 DiGeorge syndrome critical region gene 2 within coordinates
Gm20518 predicted gene 20518 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory