rs32337824 SNP Detail

Summary

• ID
  rs32337824
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:139548702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAG CGGTCTCGCT TTTCAATGTT
  Y
  CCCGCTTCCC ATACCCCTGG CTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45635818	mCV23720190	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss147682160	ENSMUSSNP603610	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
ss321384714	CHEV_4_139377306	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs32337824					SNP	C	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139548702 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15176	CpG island 15176	within coordinates
Cpgi15177	CpG island 15177	1953 bp proximal
Pax7	paired box 7	within coordinates
Rr603313	regulatory region 603313	997 bp distal
Tssr1358	transcription start site region 1358	253 bp upstream