rs32338349 SNP Detail

Summary

• ID
  rs32338349
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28527374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGAAGTTGGA TTAACCGCAG TAGATCTGTA ACCTTGAATG AGGCTCTGGA CCTTTCAAAA
  CCTACAGGGG TGTCTAGCCA AGGGTGTTAC ATGCAGTGAC TTCTGCCTAC CCCTGCCCCC
  CCCCCCCCAC GTGCACACAC ACACACACAC ACACACACAC ACACACGCAC GGAAGTTACT
  CCACTACCCT TTCTCCTCTC TGACCCCTGA CCCCTTCTCC ACTTTAGCAT GGCTTGTTTC
  CCAATTTTCT GTTCTGCTGT GAAACCCACC CAATGATTTT TTTTTTAATT TTATTTTATG
  W
  GCATTGGTGT TTTATGTGCC TGTGTGAGGG TGTCAGATAG CCTGGAACTG GAGTTAGAGA
  CAGTTGTGAG CTGCCATGTG GGTGCTAGGA ATTGAACCCG GGTCCTCTGG AAGAGCAGCT
  GGTGCTCTTA CCCCCGAGCC ATGTCTCCAG CTCCCACCCG GTGATCATTT TTGCTTCAGG
  TGTTTTGTTT GCAGTCTTCA GATTTCTAGT TGGTTCTTTG TGATGAGGCC TCAGTGACTT
  TCTAGATCCT CCTGCCTTGA CCTGCTGTCC AGCCTGCCTC TTGTTTATTC TATTTTGTCT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss46132974	mCV24572450	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs32338349					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28527374 () rs orientation: forward

Symbol	Name	Function Class
Ech1	enoyl coenzyme A hydratase 1, peroxisomal	within coordinates
Rr155798	regulatory region 155798	774 bp distal
Rr167384	regulatory region 167384	1373 bp distal
Tssr65551	transcription start site region 65551	425 bp downstream
Tssr65552	transcription start site region 65552	317 bp downstream