rs32338569 SNP Detail

Summary

• ID
  rs32338569
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:25778504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTAGGAG GGCTGTGACC
  CCCAGTAGGG TGGTTTGTGG GAATGCAGAG GTCCCCAAGG TCAGATCTCT GTAAGTGACC
  CCAGCAGTTG CCCTGTAAGC CTCACCTGGA CAGAATGTCC ACTTAGCAGT TACACGAGAC
  ACTTAGGCTG CTGCATGGGC TCCACCAAAG CCTCTGGGGT GCAGCTCTGT CCTGTGACGT
  W
  GCTACCTGAG TGTATCTCTT GTCTTAAACA CTGGGGCTCA TGAGGATTTC AGGTTCTGGA
  GTTTTTCATA TTGGAATCTC TTATCTGCCT GGCCTCTCCT GATTGGCAGT CAGAAATTCA
  AAAGTACCCC AAGATCTGAA TTTTTTTCTG TACTGAACAT TGATTTCTCC TACCCCAGTA
  CTTGTTCATA CATCCTATAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39391157	mCV22644391	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss147356415	ENSMUSSNP4355603	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32338569					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:25778504 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6971	CpG island 6971	1456 bp proximal
Myo10	myosin X	within coordinates
Tssr130836	transcription start site region 130836	278 bp downstream
Tssr130837	transcription start site region 130837	1581 bp upstream