AGCAGCGACA GGCTGGAGCC CAGTTATCAC ATGGGGCTTT AGAGCATCAA TGCAGGCTTC CACACTGAGA CTGGACCCAG CATGCCATCA CAACCTCGTG TCATGTCATA AAATTGACTT CATAGTCATT AAGGTTAGGG AAACAGAAGA AACAATCTTC CTAAAGACCT GGTATGTCTG GATGGTTGGT ATTGAGATTT R AATCTGGTGT GAACAGTAAA GGAATGTGTA ATGAATACAT TGGTAAGTTG ATGGAGAAGA CAAACCATTG TGCTTTACTT CAGACTGAGA ATTTTCAGCT TATATAAATT AAATATGAAG TGTGTTTAGT TCTTTTTGTA TCCTGATATT TTGCATATTA GTCAATTATA TAAGATTTGA TGGGTTTTAA TAATATGTAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss48153823 | NES12110624 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs32340271 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss48153823 | NES12110624 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr16:17671563 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Del(16Dgcr2-Hira)1Rak | deletion, Chr 16, Raju Kucherlapati 1 | within coordinates | ||||||
Del(16Dgcr2-Hira)3Aam | deletion, Chr 16, Alea A Mills 3 | within coordinates | ||||||
Dgcr2 | DiGeorge syndrome critical region gene 2 | within coordinates | ||||||
Gm20518 | predicted gene 20518 | within coordinates | ||||||
Rr322902 | regulatory region 322902 | 1514 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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