rs32341225 SNP Detail

Summary

• ID
  rs32341225
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:10980195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAGATAG TAACATAATT
  TGGGGGCTGG AGAAGCGGTT CTGCGGTTAA GAACACTGGC TGTTTCCCAG AGGACTGACT
  TTTGCTGCCC AGCGTTCACG TGTCACCTTA CAGCCATCTT GCCCTCAGAT ACAACACCCT
  CTTCTGGCCT CTGCAGGCAC CAGGCATGCC TACACTGCAC AGACACACAT GCAGGCAAAA
  M
  ACTCGTACCA ATTACAAAAT AAAATTTAAA AATTTAAAGC TTCTTACTTA TTTAATCTTT
  TTGCTTTAGG AGGTTTTTTG TTTGCGTCTA TATATTTTGT TATTGTTGTT GTCATTGTTG
  TTGTTGCTAT TGATTTGGAA CAGGGTCTCA TGTAGCCCAG GCTAGCTTTG AAATTGCTGT
  ATAGCCAAGG ATGACCTGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39391682	mCV24566914	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
ss147066943	ENSMUSSNP6603285	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32341225					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:10980195 () rs orientation: forward

Symbol	Name	Function Class
Amacr	alpha-methylacyl-CoA racemase	1680 bp upstream
C1qtnf3	C1q and tumor necrosis factor related protein 3	within coordinates
Cpgi6946	CpG island 6946	1232 bp proximal
Gm34315	predicted gene, 34315	within coordinates
Gm52174	predicted gene, 52174	1590 bp upstream
Rr301970	regulatory region 301970	within coordinates
Rr311562	regulatory region 311562	1005 bp proximal
Rr390344	regulatory region 390344	1950 bp downstream
Tssr130700	transcription start site region 130700	1638 bp upstream
Tssr130701	transcription start site region 130701	1671 bp upstream