rs32342068 SNP Detail

Summary

• ID
  rs32342068
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:149040357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCTAGAA TAACTGGACC
  TGCTGGACGG GTCAAACTGC TAATCTTGTT TTGGCAGCTG CAGGCTTAGT CTGGTCTTTT
  TGACAAAAAG ATAGACTGAA AGCTACTCAT TATGAACCAG TCAGCAGCTG GACTACGCTC
  CTCCATAGTC TTCCCTTTGG GCCAGACTGA GGGCTATATG ATCTCCCCCA CAACAACTTG
  Y
  GTAATTGTAA GTGGCTTTTG TGTGCTTGTG TAACTTTTTT TCTTCTTATG TAATCGTCAT
  CTCCGGGGCT TATTAACTGT CTGCTAATGT AGGCCTAGTC CTGGAAGCTT CTAGCCTCTC
  TGTACAATCT TATCTAGGCC TAGAATGTTT TCAGCCTCTG TCTTAAGGTT TCCATGGCTA
  TAAAGAGACA CCATGACCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48154368	NES11821827	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32342068					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48154368	NES11821827	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:149040357 () rs orientation: forward

Symbol	Name	Function Class
Rr148538	regulatory region 148538	358 bp distal
Tssr59643	transcription start site region 59643	932 bp upstream