rs32342563 SNP Detail

Summary

• ID
  rs32342563
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34144428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGGGGCAA CAGGGGCTTG
  CAAGGAGTTG GTACTGGGAG AAGAGGGGCT GGTATTAGGT TGTAAAGTAA ATAAATACTT
  TCTGTAAGTA TTAAAAAATA AATCTGGGGG AGATGGCTCA ATCCTTAAAG TGTGGTAGAT
  AACTAAATCC CACATTTAGA AAACCTGGAT GTATTAGTGT GAACATGTAA TCTCTGTAAT
  R
  GGGAGGCTTG CCGGCAGCCA GTCTAATCAA ATTGTTGAGT TACAAGGTCA GAGAGACCCT
  GCCTTTATAA AGGTATGAAG AGTTATCTAA GAGGACAGCT GTGTTAATCC CTGGTTTACA
  CACATGCACA CCTGCACAAA CAAATACATA CTCATAACTG GTCGGGGATG TAACCCAGGC
  CTAGTACACA GTACAGCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39392729	mCV23546324	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147538362	ENSMUSSNP4649327	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32342563					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34144428 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	745 bp downstream
Tssr131026	transcription start site region 131026	1752 bp downstream
Tssr131027	transcription start site region 131027	1317 bp downstream
Tssr131028	transcription start site region 131028	1178 bp downstream
Tssr131029	transcription start site region 131029	354 bp downstream