rs32343259 SNP Detail

Summary

• ID
  rs32343259
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185318071 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGGGGAGGT GCTTGGAATC
  CCTTTGTTCT TTCTTTCCCT GCTCACTAGA CCAAGGTCAC TCCAAACCAA AGATCTCTGG
  ACTAGAATTT ATTAGCTTAC GGAAACCCTG TCTTCCTTAT CACCTCCCAT GACACCTCCC
  ATGTCATTGT GCCAAAATGA CATGTCTGAA TCCACATGGA TTCGCTGTGT GGAGGATTTT
  Y
  TTCAGGTTCC TGACTGCATG GCCCACAGCT GTGGTTTCCT GATGTCCATC CAGTCCGTGC
  CAGGTCCCCT TGCCCCATTG CCTGCTTTAA GCAGAAATCA GTTTCAACTG TCTTATAGGT
  CTCCTGCCTC AGTCTCCATC CCCATTACAA GTGTTCCTCA CTAATCTTGC TTCAGTGACC
  TTTTGCTGGA GAGACGCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45135782	mCV24549056	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss146436928	ENSMUSSNP5451187	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss320177537	CHEV_1_187409753	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32343259					SNP	T	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185318071 () rs orientation: forward

Symbol	Name	Function Class
Rr425414	regulatory region 425414	485 bp distal
Rr425415	regulatory region 425415	1772 bp proximal