rs32345340 SNP Detail

Summary

• ID
  rs32345340
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144980633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTT TTCTTGTGTT CCTAAATCTG
  K
  GGCTGGTCTG AGCACAATTT CTTTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45636761	mCV22807789	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G
ss147850333	ENSMUSSNP1343335	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		G
ss321413243	CHEV_4_144843966	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32345340					SNP	T	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144980633 () rs orientation: forward

Symbol	Name	Function Class
Rr398674	regulatory region 398674	484 bp upstream
Rr604348	regulatory region 604348	265 bp proximal
Tssr40207	transcription start site region 40207	667 bp upstream
Tssr44535	transcription start site region 44535	373 bp downstream