rs32345948 SNP Detail

Summary

• ID
  rs32345948
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:23473356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTT AGTCTCTGCA TTGTCATTTT
  K
  CAGTTGAGTA GAACCACAGC CATTC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39392767	mCV25246714	ABI	CRAMUS_MOUSE	f	SNP		G	G				T		G
ss52537069	NES15597624	PERLEGEN	MM_PANEL2	f	SNP	G			T	T	G		T	G	T	G		T	G		G
ss147318281	ENSMUSSNP1110196	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						G
ss324891314	CHEV_15_23403025	CHEVERUD	SCREENING_POP	f	SNP												G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs32345948					SNP	G	G	G	T	T	G	T	T	G	T	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52537069	NES15597624	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:23473356 () rs orientation: forward

Symbol	Name	Function Class
Cdh18	cadherin 18	within coordinates
Cpgi6966	CpG island 6966	692 bp proximal
Gm56739	predicted gene, 56739	1157 bp upstream
Rr499807	regulatory region 499807	1979 bp distal
Tssr130794	transcription start site region 130794	1184 bp upstream