rs32346171 SNP Detail

Summary

• ID
  rs32346171
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153615306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAT GGCACCTTTA AGGCAGGATG
  M
  GGAGGGGAAC TAAGCAGTTG CTTAG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45136430	mCV24630842	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
ss145749110	ENSMUSSNP6347561	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32346171					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153615306 () rs orientation: forward

Symbol	Name	Function Class
C230024C17Rik	RIKEN cDNA C230024C17 gene	1731 bp upstream
Cpgi870	CpG island 870	603 bp proximal
Gm28513	predicted gene 28513	within coordinates
Rgs16	regulator of G-protein signaling 16	793 bp upstream
Rr420740	regulatory region 420740	1742 bp distal
Rr420741	regulatory region 420741	1348 bp distal
Rr420742	regulatory region 420742	12 bp proximal
Rr420743	regulatory region 420743	650 bp proximal
Tssr9477	transcription start site region 9477	784 bp upstream
Tssr9478	transcription start site region 9478	975 bp upstream