rs32347540 SNP Detail

Summary

• ID
  rs32347540
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:119767101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGGTTGATG TATGCCCTTG CTTGATAGGA TAGTTGGCCT
  CCTTTTCTTC TGGAAACTTC TTACAAAATT AGTTCTTCCA CTTGCATTTT ATGCTGTCAC
  S
  ACTTTCTAAC AAATGTGTGT ATGTGTATGT ATGTTTGGGG TTATGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGCATGTGT GCTTGGGGTT ATATGTGTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45637606	mCV22643536	ABI	CRAMUS_MOUSE	f	SNP	C	C		G
ss147338378	ENSMUSSNP3266602	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs32347540					SNP	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119767101 () rs orientation: forward

Symbol	Name	Function Class
Hivep3	human immunodeficiency virus type I enhancer binding protein 3	within coordinates
Rr84724	regulatory region 84724	501 bp distal
Rr91833	regulatory region 91833	1299 bp proximal
Tssr38760	transcription start site region 38760	1955 bp upstream