rs32347699 SNP Detail

Summary

• ID
  rs32347699
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:46963519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGG CTTCTGCCAT ATTGATAATA
  Y
  AGATATTAGA GTATAATATT TAGTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45136537	mCV23237868	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss149066356	ENSMUSSNP1536239	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
ss319712744	CHEV_1_46981204	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32347699					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:46963519 () rs orientation: forward

Symbol	Name	Function Class
Rr371227	regulatory region 371227	1711 bp downstream
Rr410623	regulatory region 410623	817 bp proximal
Tssr11557	transcription start site region 11557	1397 bp downstream
Tssr11558	transcription start site region 11558	1426 bp downstream