TCCAA CTCATAACTC TCCTGCATCT R CCTCTTGGGT GCTGGATTTA CAGGC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|
ss46134634 | mCV22909252 | ABI | CRAMUS_MOUSE | f | SNP | A | G | G | A |
ss145772550 | ENSMUSSNP7031566 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | G | A | |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
||||
rs32348281 | SNP | A | G | G | A |
Location: Chr7:117844905 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930583K01Rik | RIKEN cDNA 4930583K01 gene | 131 bp downstream | ||||||
Cpgi19616 | CpG island 19616 | 1295 bp distal | ||||||
Rr400585 | regulatory region 400585 | 1624 bp downstream | ||||||
Rr654425 | regulatory region 654425 | 1863 bp distal | ||||||
Rr654426 | regulatory region 654426 | 872 bp distal | ||||||
Rr654427 | regulatory region 654427 | 1456 bp distal | ||||||
Tssr68712 | transcription start site region 68712 | 1811 bp downstream | ||||||
Tssr74431 | transcription start site region 74431 | 1996 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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