rs32349119 SNP Detail

Summary

• ID
  rs32349119
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162537065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAAAGGAA CTAAGGTAAG TTCCTATGCT TTATGTATTT
  TGTTTTATAT TATATTATCA GATCCTGAAA GATAAGATAT CTATTTCCAA TCCCATATAT
  R
  AGGTAAAGTA TTTTTGGTTT TAGTAGTATT ACCTGCTGAC GCTGAAATCG TGGTGGCAAT
  GATTTCTGAA ACTGTTTGAA ATAGCCAGGT CGAGGTTGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45136268	mCV24819815	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32349119					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162537065 () rs orientation: forward

Symbol	Name	Function Class
Prrc2c	proline-rich coiled-coil 2C	Intron
Tssr9722	transcription start site region 9722	849 bp upstream
Tssr14643	transcription start site region 14643	1653 bp upstream
Tssr14644	transcription start site region 14644	92 bp downstream
Tssr14645	transcription start site region 14645	920 bp downstream
Tssr14646	transcription start site region 14646	962 bp downstream
Tssr14647	transcription start site region 14647	1006 bp downstream
Tssr14648	transcription start site region 14648	1255 bp downstream