rs32349592 SNP Detail

Summary

• ID
  rs32349592
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144176923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTACTTTTT ATTCCTGGCC
  CGTTGATTCA ACACCGTTTC TTCTCTCTGC CCCATCCAGG AAGGACAGAC AAACCCTGAG
  TTCCATCTCG TTTGTGGGAA ATCCTACTCC TGGGATTCCC TCTGTGCTCT GTGAGTGTAT
  CTGCTCCGAG TCCCTTGTCA GCACACTCCT GTGAACTGTC TGAGGGGAAA GGGAAGTTCC
  Y
  ACACACTGCT GAGCGATCAG AGATGCCGGT TAGGTAGTCA AGGAGATTTG GAGGGGAGAG
  AGTTTGATTC AGGTGTGGAG AATCTTGTAC GTCAGTTTGT GTTGCTGTCT CTGGCCAGTT
  ACCTTAGCAT CACTTCTTTT TTTTGTTGTT TTGTTTTGTT TTTGTTTTTC GAGACAGGGT
  TTCTCTGTGT AGCCCTGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144608990	ENSMUSSNP7214311	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32349592					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144176923 () rs orientation: forward

Symbol	Name	Function Class
2900089D17Rik	RIKEN cDNA 2900089D17 gene	1668 bp downstream