rs32350429 SNP Detail

Summary

• ID
  rs32350429
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:144131926 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACCTGCT GGGGCACACA
  TTTGCCATGG GCCAGTCCCT CTCCACAGGA CACAGATTTC TTCCTTCAAA TCCAAAGTGC
  AGGCTGCCTC CACCCAGACC TGGCCATCCT GCAACACAGT CCTGCAACAC AGTCCTGTGC
  AAGCAGACCC TGCCCCCTTC CTGAAGGAGG GACGACACTG GAGTTCATAA TGCTGACTCT
  Y
  CACAAGGGAA CTACCTTCCA GTGCACCACG GGAGGGAGCC CCAAACCTCC AGGATAAGAC
  CTGTACCCAT CTTGGTAGAT TGAGGCGGGG TCTTATGTAG TCCAGGCTGG CCTCAAACTT
  ATTATGGAGC CTGAGGATAC CCTTGAATTC CTGATCTTGC CTTCACCTTC AGAGTACAGA
  CATGGCGTGC CTGGCGTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45769868	mCV22338200	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss144608204	ENSMUSSNP6199364	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T		C
ss321709373	CHEV_5_144955977	CHEVERUD	SCREENING_POP	f	SNP				C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32350429					SNP	C	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144131926 () rs orientation: forward

Symbol	Name	Function Class
Bhlha15	basic helix-loop-helix family, member a15	667 bp downstream
Rr624360	regulatory region 624360	378 bp distal
Tecpr1	tectonin beta-propeller repeat containing 1	mRNA-UTR