rs32351174 SNP Detail

Summary

• ID
  rs32351174
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:144132532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGAACCCC ACTGTTATTT
  TTCCTAGAGG TGATTTGGGG TCTCTAGGTG TGGAAGGGTC CTCCCTGCCT CTGCCTCTCT
  AGGGCCAGAA TGTATGGAGG GCTCTGAGTT CCTGGCCTGG AAAGATGGGA GGTATTGCAG
  GCAGGGACCG GGGCTGAGGG ACCCAGACAG TAGTTACCAC GGCTCTTCCC CGCAGCATCC
  Y
  TCACAGACTC AGAACATGAG TGGGAGCGGC CCCCCGCAGT TTCACACCTC TGGCATTTTG
  CCAGTGCTGC AGAAATGGCT GACTCTGACC TGACTCCTTG GGTGTGGGGC CCTGGGTGAT
  GCCCTCCCAT ACAGCACAAG AAAGATTTCA GTTCTGGTTC TGCAGGCTCA GACCATCCTT
  GCCTCCAGGT GAGGAGTGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45800660	mCV22338208	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss144608223	ENSMUSSNP2415870	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C		C
ss321709377	CHEV_5_144956583	CHEVERUD	SCREENING_POP	f	SNP					T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32351174					SNP	T	C	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144132532 () rs orientation: forward

Symbol	Name	Function Class
Bhlha15	basic helix-loop-helix family, member a15	1273 bp downstream
Rr624360	regulatory region 624360	984 bp distal
Tecpr1	tectonin beta-propeller repeat containing 1	mRNA-UTR