rs32352135 SNP Detail

Summary

• ID
  rs32352135
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73977256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTTATCAC AGTTGGTAAA
  AGACATGAAG TATTTACACA AGTTCTTTTG AAGGGGACAT ACTTGTATAC TGACAGACAT
  TTATAGGGTA CACTTACACC ATTTTCTTAT TTTCTTTACT TGGACCAAAC TCACCAGCAC
  AGATGAATAA TTAATCCTGT GAAGTGTGGA CTCTCCTCCC ACAGTCCAGG GAGTCACTGC
  Y
  GTCTTACACA CACTCTCCCT GGATGGAGCT GTCAGACCTA CTGACATGCT GGAGTAGGTG
  AAGAGGGAGC AAATCATGGT TGTGTTAATG CTGAGAGCCT TGCTTTGATG CTCTCATCCT
  AACAAATTTC TATGTTTAGC TGTGACTTAA AACTCGGTTT CTTGCTTTCG TTAGGCCCAG
  TGAGAAAAGG GAAAGAACTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47155815	NES11245675	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32352135					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47155815	NES11245675	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73977256 () rs orientation: forward

Symbol	Name	Function Class
Hif1a	hypoxia inducible factor 1, alpha subunit	within coordinates
Rr467875	regulatory region 467875	966 bp proximal
Tssr113854	transcription start site region 113854	217 bp upstream
Tssr113855	transcription start site region 113855	1078 bp upstream