rs32352836 SNP Detail

Summary

• ID
  rs32352836
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30737448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCTTCTGC TTTGGTGGAA GGAAAGGAGG GGAGGGTGAG
  CACTGAGGGG AAGAGATGTG CTCAGCTCCC CAGACCTGCC TGCCAGGGCT CCCTCCACAT
  R
  GGGGTATTCC AGGCTGAAAT ACCAGGTGAC ACCTTGCTGG GATGGAGTAG GGACTCTCTT
  TGAACAGTCC AGGAGAATTA AATGTGCGCC CACTACCAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46135820	mCV22838025	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss322138604	CHEV_7_31823042	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32352836					SNP	G	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30737448 () rs orientation: forward

Symbol	Name	Function Class
Fxyd5	FXYD domain-containing ion transport regulator 5	within coordinates
Gm38984	predicted gene, 38984	within coordinates
Gm71772	predicted gene, 71772	710 bp downstream
Tssr65831	transcription start site region 65831	1015 bp downstream
Tssr65832	transcription start site region 65832	606 bp downstream
Tssr65833	transcription start site region 65833	167 bp downstream
Tssr65834	transcription start site region 65834	136 bp downstream
Tssr71891	transcription start site region 71891	1524 bp upstream
Tssr71892	transcription start site region 71892	929 bp upstream
Tssr71893	transcription start site region 71893	156 bp upstream
Tssr71894	transcription start site region 71894	133 bp upstream
Tssr71895	transcription start site region 71895	104 bp upstream
Tssr71896	transcription start site region 71896	74 bp upstream
Tssr71897	transcription start site region 71897	1036 bp downstream