rs32356271 SNP Detail

Summary

• ID
  rs32356271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12656682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATACG GCTTCATGAA CCATCATACT
  R
  TGGTCCATGT ACCAGCTGAT TAGCG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss46136493	mCV24394447	ABI	CRAMUS_MOUSE	f	SNP		A	G				A
ss51469121	NES13985236	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A	A	G		G	G	G
ss148341427	ENSMUSSNP1512360	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G				A
ss322106846	CHEV_7_13508104	CHEVERUD	SCREENING_POP	f	SNP									G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs32356271					SNP	A	A	G	G	A	A	A	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51469121	NES13985236	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12656682 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18322	CpG island 18322	within coordinates
Gm57203	predicted gene, 57203	628 bp upstream
Rps5	ribosomal protein S5	within coordinates
Rr368230	regulatory region 368230	507 bp downstream
Rr642402	regulatory region 642402	665 bp distal
Rr642403	regulatory region 642403	455 bp distal
Rr642404	regulatory region 642404	358 bp distal
Tssr64485	transcription start site region 64485	435 bp downstream
Tssr64486	transcription start site region 64486	199 bp upstream
Tssr70626	transcription start site region 70626	659 bp upstream