rs32357856 SNP Detail

Summary

• ID
  rs32357856
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37299531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACACAAAGA GAGAACATTA GGAAAGCTGG
  TGCTCCCTCA CTCGACACAA TCTCTAATGG GTTTGTCGGT TAAAATTTAA TCTTCATTCC
  TTGCTTTCAT CTAACATCCA GTCTATTTTC AAAGTTACCC aattaattta taatttttaa
  Y
  CCTGAATAGA TAActgggga agtagctcag ttatataacc ctagcttata caaggccctg
  ggttccattc ccagAAGAGA AAAAACAAAA TTAAACAGAA GAGATTATAG AAAAATTCAG
  GGTGACTGTC AACATTAATA TTAGTTATGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45137932	mCV24143427	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	T
ss148937682	ENSMUSSNP51779	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
ss319691086	CHEV_1_37317295	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32357856					SNP	T	T	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37299531 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Cpgi160	CpG island 160	828 bp proximal
Gm69908	predicted gene, 69908	within coordinates
Rr409496	regulatory region 409496	1796 bp distal