About   Help   FAQ
rs32363519 SNP Detail
Summary
  • ID
    rs32363519
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr5:146793000 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          ATAATAACAC TCTGTGGAAG AGACATGTTG ACAATTCCAA
    TCTGATCTGA GAGTGTTGAC AAAGTCTGTG GGAGTTCTGG TCACAGGGTT GAGAGGGAAA
    Y
    GAGAGGTAGC CCTCAGGGAA TGAGGGGGCT CCCTAATTCT CTGTATATAC ATATGTGAAC
    CTGTGTGATT GTATGGGCAC CACATGCATG CAGTACCCA                       
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45779581 mCV23188475 ABI CRAMUS_MOUSE f SNP C T C T
ss144660094 ENSMUSSNP776911 ENSEMBL ENSEMBL_Sanger f SNP C T T
ss321714203 CHEV_5_147667766 CHEVERUD SCREENING_POP f SNP T C
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs32363519 SNP C T C T T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr5:146793000 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm38748 predicted gene, 38748 1690 bp upstream
Rr624777 regulatory region 624777 102 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory